Usage
gene_set_score(spe, genes = NULL, assay = "cpm", name = "geneSet")
Arguments
-
spe
SpatialExperiment object
-
genes
vectors of genes to calculate gene set score
-
assay
name of the assay to use, default is "cpm"
-
name
name of the result column
Value
updated SpatialExperiment object including the gene set score
