Plot Deconvolution results
plot_deconvolution(
deconvolutions,
plot_method = "bar",
facet = "method",
palette = "Spectral"
)
A named list of deconvolution results
Type of plot to be rendered ("bar", "jitter", "scatter", "box", "heatmap")
Variable for grouping the plots ("method", "cell_type", "sample")
RColorBrewer palette name (optional), standard = "Set1"
ggplot rendered by plotly for interactivity
data("single_cell_data_1")
data("cell_type_annotations_1")
data("batch_ids_1")
data("bulk")
deconvolution <- omnideconv::deconvolute(
bulk, NULL, "bisque",
single_cell_data_1,
cell_type_annotations_1,
batch_ids_1
)
deconvolution <- list(deconvolution)
names(deconvolution) <- "bisque"
omnideconv::plot_deconvolution(deconvolution, "bar", "method", "Spectral")
#> Warning: Ignoring unknown aesthetics: text