Rename Cell Types in Deconvolution Results

Renames the cell type columns in deconvolution results to standardized names. It uses predefined mappings to replace specific cell type names with more consistent labels (e.g., "CD8T" to "T cell CD8+"). Unrecognized names are labeled as "other".

Usage

rename_cell_types(deconv_results)

Arguments

deconv_results

A data frame containing deconvolution results with cell type columns.

Value

A data frame with renamed cell type columns.

Examples

deconv_results <- data.frame(CD8T = c(0.1, 0.2), CD4T = c(0.3, 0.4))
rename_cell_types(deconv_results)
#>   T cell CD8+ T cell CD4+
#> 1         0.1         0.3
#> 2         0.2         0.4