Convert a Biobase::ExpressionSet to a gene-expression matrix.

Source: R/immune_deconvolution_methods.R

Convert a Biobase::ExpressionSet to a gene-expression matrix.

eset_to_matrix(eset, column)

Arguments

eset

ExpressionSet

column

column name of the fData() table, which contains the HGNC gene symbols.

Value

matrix with gene symbols as rownames and sample identifiers as colnames.