R/custom_deconvolution_methods.R
deconvolute_seqimmucc_custom.RdDeconvolute using seqImmuCC (LLSR regression) and a custom signature matrix
deconvolute_seqimmucc_custom(gene_expression_matrix, signature_matrix, ...)a m x n matrix with m genes and n samples. Data should be TPM normalized and log10 scaled.
a m x l matrix with m genes and l cell types. The matrix should contain only a subset of the genes useful for the analysis.
passed to the original seqImmuCC_LLSR function